Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lonrf1D3YY23 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lonrf1D3YY23 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lonrf1D3YY23 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lonrf1D3YY23 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lonrf1D3YY23 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lonrf1D3YY23 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lonrf1D3YY23 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lonrf1D3YY23 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lonrf1D3YY23 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lonrf1D3YY23 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lonrf1D3YY23 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lonrf1D3YY23 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lonrf1D3YY23 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lonrf1D3YY23 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lonrf1D3YY23 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lonrf1D3YY23 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.63■□□□□ 0.73
Lonrf1D3YY23 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.63■□□□□ 0.73
Lonrf1D3YY23 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lonrf1D3YY23 Gm12251-201ENSMUST00000117893 792 ntBASIC19.62■□□□□ 0.73
Lonrf1D3YY23 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.62■□□□□ 0.73
Lonrf1D3YY23 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.62■□□□□ 0.73
Lonrf1D3YY23 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lonrf1D3YY23 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lonrf1D3YY23 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lonrf1D3YY23 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lonrf1D3YY23 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lonrf1D3YY23 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lonrf1D3YY23 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.61■□□□□ 0.73
Lonrf1D3YY23 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.61■□□□□ 0.73
Lonrf1D3YY23 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lonrf1D3YY23 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms