Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gm10252-201ENSMUST00000209541 832 ntBASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Sh2d4bA6X942 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.42■□□□□ 0.86
Sh2d4bA6X942 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Mir6236-201ENSMUST00000184437 123 ntBASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4bA6X942 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4bA6X942 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Sh2d4bA6X942 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4bA6X942 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4bA6X942 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sh2d4bA6X942 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4bA6X942 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4bA6X942 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sh2d4bA6X942 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sh2d4bA6X942 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sh2d4bA6X942 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sh2d4bA6X942 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d4bA6X942 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Gm22325-201ENSMUST00000158904 308 ntBASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d4bA6X942 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh2d4bA6X942 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sh2d4bA6X942 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d4bA6X942 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Gm12527-201ENSMUST00000117967 564 ntBASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms