Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt28A6BLY7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt28A6BLY7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Krt28A6BLY7 Gm44549-201ENSMUST00000208351 577 ntBASIC21.34■■□□□ 1.01
Krt28A6BLY7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt28A6BLY7 Gm9987-201ENSMUST00000069768 567 ntBASIC21.34■■□□□ 1.01
Krt28A6BLY7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt28A6BLY7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt28A6BLY7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Krt28A6BLY7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Krt28A6BLY7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt28A6BLY7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt28A6BLY7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Krt28A6BLY7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Krt28A6BLY7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.33■■□□□ 1.01
Krt28A6BLY7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.33■■□□□ 1.01
Krt28A6BLY7 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.33■■□□□ 1.01
Krt28A6BLY7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Krt28A6BLY7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Krt28A6BLY7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Krt28A6BLY7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Krt28A6BLY7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Krt28A6BLY7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Krt28A6BLY7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Krt28A6BLY7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.32■■□□□ 1
Krt28A6BLY7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Krt28A6BLY7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.32■■□□□ 1
Krt28A6BLY7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.32■■□□□ 1
Krt28A6BLY7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Krt28A6BLY7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Krt28A6BLY7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.32■■□□□ 1
Krt28A6BLY7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.31■■□□□ 1
Krt28A6BLY7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.31■■□□□ 1
Krt28A6BLY7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.31■■□□□ 1
Krt28A6BLY7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.31■■□□□ 1
Krt28A6BLY7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.31■■□□□ 1
Krt28A6BLY7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Krt28A6BLY7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Krt28A6BLY7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Krt28A6BLY7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Krt28A6BLY7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.3■■□□□ 1
Krt28A6BLY7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Krt28A6BLY7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Krt28A6BLY7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Krt28A6BLY7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Krt28A6BLY7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Krt28A6BLY7 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.3■■□□□ 1
Krt28A6BLY7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Krt28A6BLY7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Krt28A6BLY7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krt28A6BLY7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.29■■□□□ 1
Krt28A6BLY7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Krt28A6BLY7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.29■■□□□ 1
Krt28A6BLY7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.29■■□□□ 1
Krt28A6BLY7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krt28A6BLY7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.29■■□□□ 1
Krt28A6BLY7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Krt28A6BLY7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Krt28A6BLY7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt28A6BLY7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.28■■□□□ 1
Krt28A6BLY7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Krt28A6BLY7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt28A6BLY7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.28■■□□□ 1
Krt28A6BLY7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Krt28A6BLY7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.28■■□□□ 1
Krt28A6BLY7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.28■■□□□ 1
Krt28A6BLY7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt28A6BLY7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Krt28A6BLY7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt28A6BLY7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krt28A6BLY7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.27■■□□□ 1
Krt28A6BLY7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.27■■□□□ 1
Krt28A6BLY7 Gm2399-201ENSMUST00000104944 225 ntBASIC21.27■■□□□ 1
Krt28A6BLY7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.27■■□□□ 1
Krt28A6BLY7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.27■■□□□ 1
Krt28A6BLY7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.27■■□□□ 1
Krt28A6BLY7 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.27■■□□□ 1
Krt28A6BLY7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krt28A6BLY7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.27■■□□□ 1
Krt28A6BLY7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krt28A6BLY7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Krt28A6BLY7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Krt28A6BLY7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.26■□□□□ 0.99
Krt28A6BLY7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krt28A6BLY7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Krt28A6BLY7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms