Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Gm45444-201ENSMUST00000211394 898 ntBASIC19.4■□□□□ 0.7
Gm5640A3KG49 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5640A3KG49 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5640A3KG49 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5640A3KG49 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5640A3KG49 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5640A3KG49 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Gm5640A3KG49 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5640A3KG49 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gm5640A3KG49 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5640A3KG49 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.38■□□□□ 0.69
Gm5640A3KG49 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Gm5640A3KG49 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm5640A3KG49 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm5640A3KG49 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Gm43530-201ENSMUST00000195920 274 ntBASIC19.36■□□□□ 0.69
Gm5640A3KG49 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5640A3KG49 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.35■□□□□ 0.69
Gm5640A3KG49 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm5640A3KG49 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms