Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav12d-1A0N8R0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12d-1A0N8R0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Gm22238-201ENSMUST00000175222 88 ntBASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12d-1A0N8R0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Serp2-204ENSMUST00000228055 705 ntBASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12d-1A0N8R0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.34■□□□□ 0.05
Trav12d-1A0N8R0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav12d-1A0N8R0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12d-1A0N8R0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12d-1A0N8R0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Trav12d-1A0N8R0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12d-1A0N8R0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms