Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc112A0AUP1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc112A0AUP1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ccdc112A0AUP1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc112A0AUP1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc112A0AUP1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc112A0AUP1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc112A0AUP1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Spcs1-204ENSMUST00000226782 949 ntBASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Gm9847-201ENSMUST00000052528 599 ntBASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc112A0AUP1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc112A0AUP1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc112A0AUP1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc112A0AUP1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.77■■□□□ 1.08
Ccdc112A0AUP1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc112A0AUP1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Ccdc112A0AUP1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc112A0AUP1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc112A0AUP1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc112A0AUP1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc112A0AUP1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc112A0AUP1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms