Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm37856-201ENSMUST00000191634 999 ntBASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm10252-201ENSMUST00000209541 832 ntBASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.2■□□□□ 0.66
Gm3854A0A1B0GSS6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.19■□□□□ 0.66
Gm3854A0A1B0GSS6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3854A0A1B0GSS6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3854A0A1B0GSS6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm3854A0A1B0GSS6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3854A0A1B0GSS6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3854A0A1B0GSS6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3854A0A1B0GSS6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Trmt13-210ENSMUST00000198454 880 ntBASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm3854A0A1B0GSS6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm26524-201ENSMUST00000192339 390 ntBASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Rab3c-203ENSMUST00000224180 967 ntBASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Gm10812-201ENSMUST00000099864 546 ntBASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gm3854A0A1B0GSS6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Gm3854A0A1B0GSS6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm3854A0A1B0GSS6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Gm3854A0A1B0GSS6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm3854A0A1B0GSS6 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms