Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv17A0A140T8P8 AA386476-201ENSMUST00000098781 1665 ntBASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv17A0A140T8P8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trbv17A0A140T8P8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Gm12251-201ENSMUST00000117893 792 ntBASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trbv17A0A140T8P8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv17A0A140T8P8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv17A0A140T8P8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv17A0A140T8P8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Gm6139-201ENSMUST00000079261 882 ntBASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv17A0A140T8P8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms