Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5580A0A0N4SVP8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.82■□□□□ 0.92
Gm5580A0A0N4SVP8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5580A0A0N4SVP8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5580A0A0N4SVP8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5580A0A0N4SVP8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5580A0A0N4SVP8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Gm5580A0A0N4SVP8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5580A0A0N4SVP8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5580A0A0N4SVP8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5580A0A0N4SVP8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5580A0A0N4SVP8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5580A0A0N4SVP8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5580A0A0N4SVP8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5580A0A0N4SVP8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5580A0A0N4SVP8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5580A0A0N4SVP8 Gm12922-201ENSMUST00000120626 809 ntBASIC20.77■□□□□ 0.92
Gm5580A0A0N4SVP8 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.77■□□□□ 0.92
Gm5580A0A0N4SVP8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5580A0A0N4SVP8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5580A0A0N4SVP8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm5580A0A0N4SVP8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.77■□□□□ 0.91
Gm5580A0A0N4SVP8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Gm5580A0A0N4SVP8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5580A0A0N4SVP8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5580A0A0N4SVP8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5580A0A0N4SVP8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5580A0A0N4SVP8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms