Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv29A0A0G2LB96 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Serp2-204ENSMUST00000228055 705 ntBASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv29A0A0G2LB96 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv29A0A0G2LB96 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv29A0A0G2LB96 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv29A0A0G2LB96 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.83■□□□□ 0.13
Trbv29A0A0G2LB96 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv29A0A0G2LB96 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv29A0A0G2LB96 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbv29A0A0G2LB96 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trbv29A0A0G2LB96 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv29A0A0G2LB96 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv29A0A0G2LB96 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms