Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Spcs1-204ENSMUST00000226782 949 ntBASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43137-201ENSMUST00000198052 594 ntBASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms