Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-4A0A0G2JG01 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13n-4A0A0G2JG01 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.46■□□□□ 0.06
Trav13n-4A0A0G2JG01 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13n-4A0A0G2JG01 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13n-4A0A0G2JG01 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13n-4A0A0G2JG01 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-4A0A0G2JG01 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gm7291-201ENSMUST00000199147 382 ntBASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gm10493-201ENSMUST00000097270 612 ntBASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13n-4A0A0G2JG01 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-4A0A0G2JG01 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav13n-4A0A0G2JG01 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 Golph3-205ENSMUST00000228671 2842 ntBASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-4A0A0G2JG01 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-4A0A0G2JG01 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms