Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm42778-201ENSMUST00000199644 553 ntBASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm42569-201ENSMUST00000200539 472 ntBASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm42642-201ENSMUST00000200683 355 ntBASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm18671-201ENSMUST00000214826 683 ntBASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Gm9988-201ENSMUST00000069786 435 ntBASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13n-1A0A0G2JEU8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.77□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav13n-1A0A0G2JEU8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms