Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav19A0A0B4J1K4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav19A0A0B4J1K4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav19A0A0B4J1K4 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav19A0A0B4J1K4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 BC021767-201ENSMUST00000126387 1716 ntBASIC14.27□□□□□ -0.13
Trav19A0A0B4J1K4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav19A0A0B4J1K4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav19A0A0B4J1K4 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms