Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-4A0A0B4J1K2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav9-4A0A0B4J1K2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.33□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9-4A0A0B4J1K2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9-4A0A0B4J1K2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm15039-201ENSMUST00000118914 875 ntBASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-4A0A0B4J1K2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-4A0A0B4J1K2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-4A0A0B4J1K2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-4A0A0B4J1K2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms