Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Igkv5-43A0A0B4J1J2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm13148-201ENSMUST00000118892 745 ntBASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm6365-201ENSMUST00000054711 744 ntBASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm10602-201ENSMUST00000098239 609 ntBASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm7290-201ENSMUST00000104990 617 ntBASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms