Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Trbv16A0A0B4J1H3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.83□□□□□ -0.19
Trbv16A0A0B4J1H3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trbv16A0A0B4J1H3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Serp2-204ENSMUST00000228055 705 ntBASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Gm9959-201ENSMUST00000068277 390 ntBASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv16A0A0B4J1H3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv16A0A0B4J1H3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv16A0A0B4J1H3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv16A0A0B4J1H3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.79□□□□□ -0.2
Trbv16A0A0B4J1H3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms