Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv15A0A0A6YYE3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
Trbv15A0A0A6YYE3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv15A0A0A6YYE3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv15A0A0A6YYE3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv15A0A0A6YYE3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv15A0A0A6YYE3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trbv15A0A0A6YYE3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv15A0A0A6YYE3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv15A0A0A6YYE3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv15A0A0A6YYE3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv15A0A0A6YYE3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv15A0A0A6YYE3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv15A0A0A6YYE3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms