Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.71■□□□□ 0.43
Ighv1-43A0A0A6YXN5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Nespas-201ENSMUST00000143738 1083 ntBASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Gm6365-201ENSMUST00000054711 744 ntBASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ighv1-43A0A0A6YXN5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.64■□□□□ 0.42
Ighv1-43A0A0A6YXN5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.64■□□□□ 0.41
Ighv1-43A0A0A6YXN5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms