Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Gm9988-201ENSMUST00000069786 435 ntBASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 Gm10493-201ENSMUST00000097270 612 ntBASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm28778A0A087WSK7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm28778A0A087WSK7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm28778A0A087WSK7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm28778A0A087WSK7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Gm28778A0A087WSK7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm28778A0A087WSK7 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.52■□□□□ 0.07
Gm28778A0A087WSK7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.52■□□□□ 0.07
Gm28778A0A087WSK7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm28778A0A087WSK7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Gm38205-201ENSMUST00000192243 258 ntBASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm28778A0A087WSK7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Reep4-203ENSMUST00000226563 1444 ntBASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm28778A0A087WSK7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm28778A0A087WSK7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Gm18284-201ENSMUST00000172604 624 ntBASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Gm5874-201ENSMUST00000096101 508 ntBASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm28778A0A087WSK7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms