Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-4-dv7A0A075B6C2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 AA386476-201ENSMUST00000098781 1665 ntBASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms