Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm9870-201ENSMUST00000063874 645 ntBASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6n-6A0A075B6B2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6n-6A0A075B6B2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6n-6A0A075B6B2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6n-6A0A075B6B2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6n-6A0A075B6B2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm12922-201ENSMUST00000120626 809 ntBASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms