Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-7A0A075B6B0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Gm8493-201ENSMUST00000196881 489 ntBASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-7A0A075B6B0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Trav6d-7A0A075B6B0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-7A0A075B6B0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-7A0A075B6B0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-7A0A075B6B0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-7A0A075B6B0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Mir6236-201ENSMUST00000184437 123 ntBASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm6139-201ENSMUST00000079261 882 ntBASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-7A0A075B6B0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.67□□□□□ -0.06
Trav6d-7A0A075B6B0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms