Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav18A0A075B656 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav18A0A075B656 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.62■□□□□ 0.09
Trav18A0A075B656 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav18A0A075B656 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.61■□□□□ 0.09
Trav18A0A075B656 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.61■□□□□ 0.09
Trav18A0A075B656 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.61■□□□□ 0.09
Trav18A0A075B656 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav18A0A075B656 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.6■□□□□ 0.09
Trav18A0A075B656 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav18A0A075B656 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav18A0A075B656 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav18A0A075B656 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Trav18A0A075B656 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav18A0A075B656 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav18A0A075B656 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav18A0A075B656 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav18A0A075B656 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav18A0A075B656 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms