Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16nA0A075B634 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav16nA0A075B634 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav16nA0A075B634 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Gm40881-201ENSMUST00000223397 166 ntBASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16nA0A075B634 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 AA386476-201ENSMUST00000098781 1665 ntBASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16nA0A075B634 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Gm5921-201ENSMUST00000075898 882 ntBASIC14.43□□□□□ -0.1
Trav16nA0A075B634 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16nA0A075B634 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.42□□□□□ -0.1
Trav16nA0A075B634 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Trav16nA0A075B634 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16nA0A075B634 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16nA0A075B634 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16nA0A075B634 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16nA0A075B634 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms