Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4d-3A0A075B625 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav4d-3A0A075B625 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.02□□□□□ -0.32
Trav4d-3A0A075B625 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4d-3A0A075B625 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4d-3A0A075B625 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trav4d-3A0A075B625 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4d-3A0A075B625 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4d-3A0A075B625 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4d-3A0A075B625 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4d-3A0A075B625 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4d-3A0A075B625 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Gm9885-202ENSMUST00000186234 2209 ntBASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms