Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-4A0A075B620 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-4A0A075B620 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-4A0A075B620 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-4A0A075B620 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav7n-4A0A075B620 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-4A0A075B620 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Gm14523-201ENSMUST00000117260 558 ntBASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-4A0A075B620 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7n-4A0A075B620 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Gm27502-201ENSMUST00000183495 199 ntBASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7n-4A0A075B620 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav7n-4A0A075B620 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav7n-4A0A075B620 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav7n-4A0A075B620 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7n-4A0A075B620 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms