Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 BC021767-201ENSMUST00000126387 1716 ntBASIC14.07□□□□□ -0.16
Trav16d-dv11A0A075B617 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Mir6236-201ENSMUST00000184437 123 ntBASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16d-dv11A0A075B617 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16d-dv11A0A075B617 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16d-dv11A0A075B617 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16d-dv11A0A075B617 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16d-dv11A0A075B617 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16d-dv11A0A075B617 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16d-dv11A0A075B617 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms