Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-53A0A075B5W3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-53A0A075B5W3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-53A0A075B5W3 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Gm13241-201ENSMUST00000094493 780 ntBASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-53A0A075B5W3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-53A0A075B5W3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Gm12251-201ENSMUST00000117893 792 ntBASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-53A0A075B5W3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-53A0A075B5W3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-53A0A075B5W3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-53A0A075B5W3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-53A0A075B5W3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.35□□□□□ -0.11
Ighv1-53A0A075B5W3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms