Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb3S4R1G7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb3S4R1G7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb3S4R1G7 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.21■□□□□ 0.35
H2afb3S4R1G7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb3S4R1G7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb3S4R1G7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb3S4R1G7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb3S4R1G7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H2afb3S4R1G7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
H2afb3S4R1G7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb3S4R1G7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb3S4R1G7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb3S4R1G7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb3S4R1G7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb3S4R1G7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
H2afb3S4R1G7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
H2afb3S4R1G7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
H2afb3S4R1G7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms