Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nr1h3Q9Z0Y9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nr1h3Q9Z0Y9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nr1h3Q9Z0Y9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nr1h3Q9Z0Y9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h3Q9Z0Y9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h3Q9Z0Y9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h3Q9Z0Y9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h3Q9Z0Y9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h3Q9Z0Y9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr1h3Q9Z0Y9 AA386476-201ENSMUST00000098781 1665 ntBASIC20.83■□□□□ 0.92
Nr1h3Q9Z0Y9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h3Q9Z0Y9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nr1h3Q9Z0Y9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm7290-201ENSMUST00000104990 617 ntBASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm12918-201ENSMUST00000120234 636 ntBASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm15710-201ENSMUST00000121821 636 ntBASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm38205-201ENSMUST00000192243 258 ntBASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm5075-201ENSMUST00000196916 622 ntBASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h3Q9Z0Y9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.79■□□□□ 0.92
Nr1h3Q9Z0Y9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.78■□□□□ 0.92
Nr1h3Q9Z0Y9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nr1h3Q9Z0Y9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Nr1h3Q9Z0Y9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.77■□□□□ 0.92
Nr1h3Q9Z0Y9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Nr1h3Q9Z0Y9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.77■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm6365-201ENSMUST00000054711 744 ntBASIC20.77■□□□□ 0.92
Nr1h3Q9Z0Y9 Gm4968-201ENSMUST00000071458 858 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms