Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn13Q9Z0S4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cldn13Q9Z0S4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn13Q9Z0S4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn13Q9Z0S4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn13Q9Z0S4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn13Q9Z0S4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.08■□□□□ 0.32
Cldn13Q9Z0S4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.08■□□□□ 0.32
Cldn13Q9Z0S4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.08■□□□□ 0.32
Cldn13Q9Z0S4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn13Q9Z0S4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn13Q9Z0S4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn13Q9Z0S4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn13Q9Z0S4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 AA386476-201ENSMUST00000098781 1665 ntBASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Gm43060-201ENSMUST00000200621 289 ntBASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn13Q9Z0S4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn13Q9Z0S4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.03■□□□□ 0.32
Cldn13Q9Z0S4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms