Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Clcn5Q9WVD4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn5Q9WVD4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.89■□□□□ 0.77
Clcn5Q9WVD4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Clcn5Q9WVD4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn5Q9WVD4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Clcn5Q9WVD4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.89■□□□□ 0.77
Clcn5Q9WVD4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Clcn5Q9WVD4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Clcn5Q9WVD4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Gm10812-201ENSMUST00000099864 546 ntBASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clcn5Q9WVD4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Clcn5Q9WVD4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Gm5408-201ENSMUST00000197998 747 ntBASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn5Q9WVD4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Clcn5Q9WVD4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.83■□□□□ 0.77
Clcn5Q9WVD4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn5Q9WVD4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.83■□□□□ 0.77
Clcn5Q9WVD4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.83■□□□□ 0.77
Clcn5Q9WVD4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn5Q9WVD4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn5Q9WVD4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn5Q9WVD4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms