Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CcsQ9WU84 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.85□□□□□ -0.03
CcsQ9WU84 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CcsQ9WU84 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CcsQ9WU84 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CcsQ9WU84 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CcsQ9WU84 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.85□□□□□ -0.03
CcsQ9WU84 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.84□□□□□ -0.03
CcsQ9WU84 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CcsQ9WU84 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
CcsQ9WU84 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CcsQ9WU84 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.84□□□□□ -0.03
CcsQ9WU84 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.84□□□□□ -0.03
CcsQ9WU84 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CcsQ9WU84 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CcsQ9WU84 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CcsQ9WU84 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CcsQ9WU84 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CcsQ9WU84 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.83□□□□□ -0.04
CcsQ9WU84 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CcsQ9WU84 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.83□□□□□ -0.04
CcsQ9WU84 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.83□□□□□ -0.04
CcsQ9WU84 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CcsQ9WU84 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CcsQ9WU84 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CcsQ9WU84 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.82□□□□□ -0.04
CcsQ9WU84 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CcsQ9WU84 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.82□□□□□ -0.04
CcsQ9WU84 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.82□□□□□ -0.04
CcsQ9WU84 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CcsQ9WU84 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CcsQ9WU84 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CcsQ9WU84 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.8□□□□□ -0.04
CcsQ9WU84 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.8□□□□□ -0.04
CcsQ9WU84 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.8□□□□□ -0.04
CcsQ9WU84 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CcsQ9WU84 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CcsQ9WU84 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CcsQ9WU84 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CcsQ9WU84 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CcsQ9WU84 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CcsQ9WU84 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms