Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tubd1Q9R1K7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tubd1Q9R1K7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tubd1Q9R1K7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Gm38205-201ENSMUST00000192243 258 ntBASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tubd1Q9R1K7 Gm13146-201ENSMUST00000118508 780 ntBASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Gm10493-201ENSMUST00000097270 612 ntBASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubd1Q9R1K7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Tubd1Q9R1K7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubd1Q9R1K7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms