Protein–RNA interactions for Protein: Q9JK54

Msgn1, Mesogenin-1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msgn1Q9JK54 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msgn1Q9JK54 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.06■□□□□ 0.96
Msgn1Q9JK54 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Msgn1Q9JK54 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Msgn1Q9JK54 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Msgn1Q9JK54 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msgn1Q9JK54 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.06■□□□□ 0.96
Msgn1Q9JK54 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Msgn1Q9JK54 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Msgn1Q9JK54 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.04■□□□□ 0.96
Msgn1Q9JK54 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.04■□□□□ 0.96
Msgn1Q9JK54 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Gm12896-201ENSMUST00000118430 226 ntBASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Msgn1Q9JK54 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msgn1Q9JK54 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Msgn1Q9JK54 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Msgn1Q9JK54 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msgn1Q9JK54 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Msgn1Q9JK54 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Msgn1Q9JK54 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msgn1Q9JK54 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msgn1Q9JK54 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Msgn1Q9JK54 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.99■□□□□ 0.95
Msgn1Q9JK54 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Gm5643-201ENSMUST00000117081 966 ntBASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Mir7071-201ENSMUST00000184847 69 ntBASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Msgn1Q9JK54 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msgn1Q9JK54 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msgn1Q9JK54 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msgn1Q9JK54 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msgn1Q9JK54 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msgn1Q9JK54 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms