Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
NckipsdQ9ESJ4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NckipsdQ9ESJ4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.02■□□□□ 0.8
NckipsdQ9ESJ4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NckipsdQ9ESJ4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
NckipsdQ9ESJ4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NckipsdQ9ESJ4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NckipsdQ9ESJ4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NckipsdQ9ESJ4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NckipsdQ9ESJ4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NckipsdQ9ESJ4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Gm6365-201ENSMUST00000054711 744 ntBASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NckipsdQ9ESJ4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Gm7290-201ENSMUST00000104990 617 ntBASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Gm12918-201ENSMUST00000120234 636 ntBASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Gm15710-201ENSMUST00000121821 636 ntBASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Gm5075-201ENSMUST00000196916 622 ntBASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Gm20100-201ENSMUST00000209418 2272 ntBASIC20■□□□□ 0.79
NckipsdQ9ESJ4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
NckipsdQ9ESJ4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NckipsdQ9ESJ4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NckipsdQ9ESJ4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Gm12441-201ENSMUST00000121806 588 ntBASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NckipsdQ9ESJ4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NckipsdQ9ESJ4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.96■□□□□ 0.79
NckipsdQ9ESJ4 Gm13148-201ENSMUST00000118892 745 ntBASIC19.96■□□□□ 0.79
NckipsdQ9ESJ4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.96■□□□□ 0.79
NckipsdQ9ESJ4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NckipsdQ9ESJ4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NckipsdQ9ESJ4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
NckipsdQ9ESJ4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Gm4968-201ENSMUST00000071458 858 ntBASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NckipsdQ9ESJ4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NckipsdQ9ESJ4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms