Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn3Q9ES97 Gm26833-201ENSMUST00000180899 440 ntBASIC20.4■□□□□ 0.86
Rtn3Q9ES97 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn3Q9ES97 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rtn3Q9ES97 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn3Q9ES97 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn3Q9ES97 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn3Q9ES97 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn3Q9ES97 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn3Q9ES97 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.39■□□□□ 0.86
Rtn3Q9ES97 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn3Q9ES97 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn3Q9ES97 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.39■□□□□ 0.85
Rtn3Q9ES97 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn3Q9ES97 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn3Q9ES97 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn3Q9ES97 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn3Q9ES97 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn3Q9ES97 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rtn3Q9ES97 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn3Q9ES97 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn3Q9ES97 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn3Q9ES97 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.35■□□□□ 0.85
Rtn3Q9ES97 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn3Q9ES97 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn3Q9ES97 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn3Q9ES97 Golph3-205ENSMUST00000228671 2842 ntBASIC20.35■□□□□ 0.85
Rtn3Q9ES97 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn3Q9ES97 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn3Q9ES97 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn3Q9ES97 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn3Q9ES97 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rtn3Q9ES97 AA386476-201ENSMUST00000098781 1665 ntBASIC20.33■□□□□ 0.85
Rtn3Q9ES97 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn3Q9ES97 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Rtn3Q9ES97 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn3Q9ES97 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn3Q9ES97 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtn3Q9ES97 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtn3Q9ES97 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtn3Q9ES97 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rtn3Q9ES97 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rtn3Q9ES97 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.32■□□□□ 0.84
Rtn3Q9ES97 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn3Q9ES97 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn3Q9ES97 Gm43060-201ENSMUST00000200621 289 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms