Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mmp1bQ9EPL6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Gm9870-201ENSMUST00000063874 645 ntBASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.86■□□□□ 0.29
Mmp1bQ9EPL6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Mmp1bQ9EPL6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mmp1bQ9EPL6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mmp1bQ9EPL6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Mmp1bQ9EPL6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp1bQ9EPL6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
Mmp1bQ9EPL6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.83■□□□□ 0.28
Mmp1bQ9EPL6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp1bQ9EPL6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.83■□□□□ 0.28
Mmp1bQ9EPL6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.83■□□□□ 0.28
Mmp1bQ9EPL6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp1bQ9EPL6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp1bQ9EPL6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Rarb-207ENSMUST00000225921 2756 ntBASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.8■□□□□ 0.28
Mmp1bQ9EPL6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms