Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.12■□□□□ 0.33
Ap3s1Q9DCR2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap3s1Q9DCR2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap3s1Q9DCR2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ap3s1Q9DCR2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ap3s1Q9DCR2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.08■□□□□ 0.32
Ap3s1Q9DCR2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ap3s1Q9DCR2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ap3s1Q9DCR2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ap3s1Q9DCR2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ap3s1Q9DCR2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms