Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssmem1Q9D9Y8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssmem1Q9D9Y8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssmem1Q9D9Y8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssmem1Q9D9Y8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ssmem1Q9D9Y8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssmem1Q9D9Y8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssmem1Q9D9Y8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssmem1Q9D9Y8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ssmem1Q9D9Y8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Reep4-203ENSMUST00000226563 1444 ntBASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Gm13234-201ENSMUST00000120010 747 ntBASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ssmem1Q9D9Y8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ssmem1Q9D9Y8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssmem1Q9D9Y8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssmem1Q9D9Y8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssmem1Q9D9Y8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Ssmem1Q9D9Y8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ssmem1Q9D9Y8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssmem1Q9D9Y8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Gm10033-202ENSMUST00000211874 928 ntBASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssmem1Q9D9Y8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssmem1Q9D9Y8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssmem1Q9D9Y8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ssmem1Q9D9Y8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssmem1Q9D9Y8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssmem1Q9D9Y8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Gm42569-201ENSMUST00000200539 472 ntBASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssmem1Q9D9Y8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssmem1Q9D9Y8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ssmem1Q9D9Y8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssmem1Q9D9Y8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms