Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cldn22Q9D7U6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn22Q9D7U6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn22Q9D7U6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cldn22Q9D7U6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cldn22Q9D7U6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Cldn22Q9D7U6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Cldn22Q9D7U6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cldn22Q9D7U6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn22Q9D7U6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn22Q9D7U6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn22Q9D7U6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn22Q9D7U6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Gm10493-201ENSMUST00000097270 612 ntBASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn22Q9D7U6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn22Q9D7U6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.21■□□□□ 0.67
Cldn22Q9D7U6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Cldn22Q9D7U6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn22Q9D7U6 Gm11421-201ENSMUST00000122124 294 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms