Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssr1Q9CY50 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssr1Q9CY50 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Golgb1-201ENSMUST00000023534 498 ntBASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssr1Q9CY50 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssr1Q9CY50 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 AA386476-201ENSMUST00000098781 1665 ntBASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ssr1Q9CY50 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssr1Q9CY50 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ssr1Q9CY50 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssr1Q9CY50 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
Ssr1Q9CY50 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssr1Q9CY50 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssr1Q9CY50 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssr1Q9CY50 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.64■□□□□ 0.89
Ssr1Q9CY50 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssr1Q9CY50 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssr1Q9CY50 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssr1Q9CY50 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssr1Q9CY50 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ssr1Q9CY50 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms