Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc3Q9CWU5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc3Q9CWU5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Khdc3Q9CWU5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc3Q9CWU5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc3Q9CWU5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc3Q9CWU5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc3Q9CWU5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc3Q9CWU5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc3Q9CWU5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.39■□□□□ 0.53
Khdc3Q9CWU5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc3Q9CWU5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Khdc3Q9CWU5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Gm43173-201ENSMUST00000202246 593 ntBASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Gm6139-201ENSMUST00000079261 882 ntBASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Khdc3Q9CWU5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc3Q9CWU5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc3Q9CWU5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.35■□□□□ 0.53
Khdc3Q9CWU5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.35■□□□□ 0.53
Khdc3Q9CWU5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Khdc3Q9CWU5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Khdc3Q9CWU5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc3Q9CWU5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc3Q9CWU5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc3Q9CWU5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.33■□□□□ 0.53
Khdc3Q9CWU5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc3Q9CWU5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.33■□□□□ 0.52
Khdc3Q9CWU5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc3Q9CWU5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc3Q9CWU5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc3Q9CWU5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc3Q9CWU5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc3Q9CWU5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Smad6-203ENSMUST00000179458 273 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms