Protein–RNA interactions for Protein: Q9CR09

Ufc1, Ubiquitin-fold modifier-conjugating enzyme 1, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufc1Q9CR09 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ufc1Q9CR09 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ufc1Q9CR09 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Ufc1Q9CR09 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.08■□□□□ 0.01
Ufc1Q9CR09 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Ufc1Q9CR09 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ufc1Q9CR09 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ufc1Q9CR09 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ufc1Q9CR09 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.08■□□□□ 0
Ufc1Q9CR09 Gm21956-201ENSMUST00000179946 522 ntBASIC15.08■□□□□ 0
Ufc1Q9CR09 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.08■□□□□ 0
Ufc1Q9CR09 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ufc1Q9CR09 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ufc1Q9CR09 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ufc1Q9CR09 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ufc1Q9CR09 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ufc1Q9CR09 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.07■□□□□ 0
Ufc1Q9CR09 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Gm43137-201ENSMUST00000198052 594 ntBASIC15.07■□□□□ 0
Ufc1Q9CR09 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.07■□□□□ 0
Ufc1Q9CR09 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Ufc1Q9CR09 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Ufc1Q9CR09 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ufc1Q9CR09 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ufc1Q9CR09 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.06■□□□□ 0
Ufc1Q9CR09 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.06■□□□□ 0
Ufc1Q9CR09 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.06■□□□□ 0
Ufc1Q9CR09 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.06■□□□□ 0
Ufc1Q9CR09 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.06■□□□□ 0
Ufc1Q9CR09 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ufc1Q9CR09 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.06■□□□□ 0
Ufc1Q9CR09 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ufc1Q9CR09 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ufc1Q9CR09 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ufc1Q9CR09 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ufc1Q9CR09 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.05■□□□□ 0
Ufc1Q9CR09 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.05■□□□□ 0
Ufc1Q9CR09 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ufc1Q9CR09 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ufc1Q9CR09 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.05■□□□□ -0
Ufc1Q9CR09 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.05■□□□□ -0
Ufc1Q9CR09 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ufc1Q9CR09 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ufc1Q9CR09 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ufc1Q9CR09 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ufc1Q9CR09 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ufc1Q9CR09 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ufc1Q9CR09 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms