Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Gm15823-201ENSMUST00000064305 670 ntBASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retreg3Q9CQV4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retreg3Q9CQV4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retreg3Q9CQV4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retreg3Q9CQV4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Gm27405-201ENSMUST00000184201 112 ntBASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.27■□□□□ 0.68
Retreg3Q9CQV4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retreg3Q9CQV4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.26■□□□□ 0.67
Retreg3Q9CQV4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Retreg3Q9CQV4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg3Q9CQV4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.26■□□□□ 0.67
Retreg3Q9CQV4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg3Q9CQV4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg3Q9CQV4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg3Q9CQV4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg3Q9CQV4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms