Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt88Q9CPR6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 AA386476-201ENSMUST00000098781 1665 ntBASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Gm40881-201ENSMUST00000223397 166 ntBASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt88Q9CPR6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Gm5921-201ENSMUST00000075898 882 ntBASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.29■□□□□ 0.36
Krt88Q9CPR6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt88Q9CPR6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 BC021767-201ENSMUST00000126387 1716 ntBASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt88Q9CPR6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.27■□□□□ 0.36
Krt88Q9CPR6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt88Q9CPR6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Krt88Q9CPR6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt88Q9CPR6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Krt88Q9CPR6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt88Q9CPR6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt88Q9CPR6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Krt88Q9CPR6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt88Q9CPR6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt88Q9CPR6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Gm9870-201ENSMUST00000063874 645 ntBASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt88Q9CPR6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms