Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Trim34aQ99PP6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34aQ99PP6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34aQ99PP6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
Trim34aQ99PP6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34aQ99PP6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
Trim34aQ99PP6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34aQ99PP6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.77■■□□□ 1.4
Trim34aQ99PP6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34aQ99PP6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34aQ99PP6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim34aQ99PP6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim34aQ99PP6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim34aQ99PP6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.75■■□□□ 1.39
Trim34aQ99PP6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Trim34aQ99PP6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.75■■□□□ 1.39
Trim34aQ99PP6 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.75■■□□□ 1.39
Trim34aQ99PP6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim34aQ99PP6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34aQ99PP6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.74■■□□□ 1.39
Trim34aQ99PP6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Trim34aQ99PP6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34aQ99PP6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trim34aQ99PP6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trim34aQ99PP6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34aQ99PP6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.73■■□□□ 1.39
Trim34aQ99PP6 Gm13168-201ENSMUST00000121771 632 ntBASIC23.73■■□□□ 1.39
Trim34aQ99PP6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.73■■□□□ 1.39
Trim34aQ99PP6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.73■■□□□ 1.39
Trim34aQ99PP6 Gm26524-201ENSMUST00000192339 390 ntBASIC23.73■■□□□ 1.39
Trim34aQ99PP6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.73■■□□□ 1.39
Trim34aQ99PP6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim34aQ99PP6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Trim34aQ99PP6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Trim34aQ99PP6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Gm37856-201ENSMUST00000191634 999 ntBASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34aQ99PP6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Rab3c-203ENSMUST00000224180 967 ntBASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms