Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1dQ99246 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Cacna1dQ99246 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1dQ99246 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1dQ99246 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna1dQ99246 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1dQ99246 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1dQ99246 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna1dQ99246 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.12■□□□□ 0.65
Cacna1dQ99246 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cacna1dQ99246 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.11■□□□□ 0.65
Cacna1dQ99246 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1dQ99246 Gm10653-202ENSMUST00000139570 835 ntBASIC19.1■□□□□ 0.65
Cacna1dQ99246 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1dQ99246 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.1■□□□□ 0.65
Cacna1dQ99246 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1dQ99246 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1dQ99246 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1dQ99246 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1dQ99246 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1dQ99246 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1dQ99246 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1dQ99246 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1dQ99246 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1dQ99246 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1dQ99246 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1dQ99246 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Cacna1dQ99246 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1dQ99246 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1dQ99246 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms