Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm9Q96EQ9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm9Q96EQ9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.94■□□□□ 0.62
Prdm9Q96EQ9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm9Q96EQ9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Prdm9Q96EQ9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm9Q96EQ9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm9Q96EQ9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.91■□□□□ 0.62
Prdm9Q96EQ9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Prdm9Q96EQ9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.91■□□□□ 0.62
Prdm9Q96EQ9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm9Q96EQ9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm9Q96EQ9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm9Q96EQ9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Prdm9Q96EQ9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Gm29257-201ENSMUST00000186115 639 ntBASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm9Q96EQ9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Prdm9Q96EQ9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prdm9Q96EQ9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm9Q96EQ9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Prdm9Q96EQ9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm9Q96EQ9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prdm9Q96EQ9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prdm9Q96EQ9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms